tkensdf_reader.cpp

/********************************************************************************
 *   Copyright (c) : Université de Lyon 1, CNRS/IN2P3, UMR5822,                 *
 *                   IP2I, F-69622 Villeurbanne Cedex, France                   *
 *                   Normandie Université, ENSICAEN, UNICAEN, CNRS/IN2P3,       *
 *                   LPC Caen, F-14000 Caen, France                             *
 *   Contibutor(s) :                                                            *
 *      Jérémie Dudouet jeremie.dudouet@cnrs.fr [2020]                          *
 *      Diego Gruyer    diego.gruyer@cnrs.fr    [2020]                          *
 *                                                                              *
 *    This software is governed by the CeCILL-B license under French law and    *
 *    abiding by the  rules of distribution of free  software.  You can use,    *
 *    modify  and/ or  redistribute  the  software under  the  terms of  the    *
 *    CeCILL-B license as circulated by CEA, CNRS and INRIA at the following    *
 *    URL \"http://www.cecill.info\".                                           *
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#include <dirent.h>
 
#include "tkensdf_reader.h"
#include "tklog.h"
 
namespace tkn {
}
 
using namespace tkn;
using namespace std;
 
bool tkensdf_reader::open_nuc(const tkstring &_nuc_name , const ensdf_data_type &_ftype)
{
    glog.set_class("ensdf_ascii_reader");
    glog.set_method(tkstring::form("open_nuc(%s,%d)",_nuc_name.data(),_ftype));
 
    if(TKN_SYS == nullptr) {
        glog << error_v << " TKN_SYS environment variable not defined, cannot find the repository of the data bases !" << do_endl;
        glog.clear();
        return false;
    }
 
    tkstring testnuc = _nuc_name.copy().to_lower();
    testnuc.capitalize();
 
    tkstring file_name;
    if(_ftype == kensdf) file_name = tkstring::Form("%s/ENSDF/%s.ens",finput_folder.data(),_nuc_name.data());
    else if(_ftype == kxundl) file_name = tkstring::Form("%s/XUNDL/%s.ens",finput_folder.data(),_nuc_name.data());
    else {
        glog << warning_v << " database for nucleus " << _nuc_name << " not found" << do_endl;
        glog.clear();
        return false;
    }
 
    fdata_type = _ftype;
    fNucleus = testnuc;
    glog.clear();
 
    return open_file(file_name);
}
 
bool tkensdf_reader::open_file(const tkstring &_file_name)
{
    glog.set_class("ensdf_ascii_reader");
    glog.set_method(tkstring::form("open_file(%s)", _file_name.data()));
 
    if ( fEnsdf_file.is_open() ) {
        close_file() ;
    }
    fEnsdf_file.open(_file_name);
 
    tkstring record;
    tkensdf_record the_record;
    tkensdf_ident_rec the_identification_record;
 
    // counters
    int read_record = 0;
 
    // true if a new data set is found
    bool new_dataset = false;
 
    // read the file and create the list of data sets.
    while( true  ) {
        getline(fEnsdf_file,record);
 
        if(! fEnsdf_file.good()) break;
 
        if(!the_record.set_record(record)) {
            glog << error_v << "error in : " << record << do_endl;
            continue;
        }
 
        if(!the_record.is_continuation_record()) frecords_counter[the_record.get_record_type()].first++;
        frecords_counter[the_record.get_record_type()].second++;
 
 
        // end of file
        if ( !fEnsdf_file && new_dataset) {
            the_identification_record.fposition.second = read_record;
            fDataSets.push_back(the_identification_record);
            the_identification_record.clear();
            break;
        }
 
        read_record++;
 
        if(the_record.get_record_type() == tkensdf_record::kident && !new_dataset) {
            the_identification_record.set_record(record);
            the_identification_record.set_current_position(read_record);
            the_identification_record.set_start_position(read_record);
 
            if(fVerbose) the_identification_record.print(std::cout);
            new_dataset = true;
        }
        if ( the_record.get_record_type() == tkensdf_record::kend && new_dataset ) {
            the_identification_record.set_stpop_position(read_record);
            fDataSets.push_back(the_identification_record);
            the_identification_record.clear();
            new_dataset = false;
        }
    } // is_open
    if(fVerbose) glog << info << fDataSets.size() << " datasets have been found in the ENSDF file " << _file_name << do_endl;
 
    glog.clear();
    return fEnsdf_file.is_open();
}
 
void tkensdf_reader::print_datasets()
{
    if(!fEnsdf_file.is_open()) {
        glog << error << "No ENSDF database opened" << do_endl;
        return;
    }
    tkstring data_type = "ENSDF";
    if(fdata_type==kxundl) data_type = "XUNDL";
    glog << info << "Database type: "<< data_type << do_endl;
    glog << info << fDataSets.size() << " datasets have been found for nucleus " << fNucleus << ":"<< do_endl;
    for(auto &key: fDataSets) key.print(std::cout);
}
 
bool tkensdf_reader::first_record(tkensdf_ident_rec *_dataset, tkstring &record)
{
    // to remove any error flag
    fEnsdf_file.clear();
 
    if(_dataset == nullptr) return false;
    _dataset->set_current_position(_dataset->get_start_position());
    fEnsdf_file.seekg(_dataset->get_current_position()*tkensdf_record::RSIZE,std::ios::beg);
    getline(fEnsdf_file,record);
    return fEnsdf_file.good();
}
 
bool tkensdf_reader::next_record(tkensdf_ident_rec *_dataset, tkstring &record)
{
    if(_dataset == nullptr) return false;
    _dataset->set_current_position(_dataset->get_current_position()+1);
    if(_dataset->get_current_position() >= _dataset->get_stop_position()) return false;
    getline(fEnsdf_file,record);
    return fEnsdf_file.good();
}
 
void tkensdf_reader::close_file()
{
    fDataSets.clear();
    fEnsdf_file.close();
    fEnsdf_file.clear();
    fNucleus.clear();
}
 
void tkensdf_reader::print_record_counters()
{
    std::cout<<std::endl;
    glog << info << "Record counters:" << do_endl;
 
    size_t maxsize1=0;
    size_t maxsize2=0;
    for(auto i: frecords_counter) {
        if(tkstring::Form("%lld",i.second.first).length()>maxsize1) maxsize1 = tkstring::Form("%lld",i.second.first).length();
        if(tkstring::Form("%lld",i.second.second).length()>maxsize2) maxsize2 = tkstring::Form("%lld",i.second.second).length();
    }
    std::cout<< left << " - Record Type     :  counts without(with) continuation records" << std::endl;
    for(auto i: frecords_counter) {
        if(i.first == tkensdf_record::kident)         std::cout<< left << " - identification  : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::khistory)  std::cout<< left << " - History         : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kq_value)  std::cout<< left << " - Q-value         : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kxref)     std::cout<< left << " - X-ref           : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kcomment)  std::cout<< left << " - Comment         : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kparent)   std::cout<< left << " - Parent          : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::knorm)     std::cout<< left << " - Normalisation   : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kprodnorm) std::cout<< left << " - Production norm : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::klevel)    std::cout<< left << " - Level           : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kbeta)     std::cout<< left << " - Beta            : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kec)       std::cout<< left << " - EC              : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kalpha)    std::cout<< left << " - Alpha           : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kparticle) std::cout<< left << " - Particle        : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kgamma)    std::cout<< left << " - Gamma           : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kreference)std::cout<< left << " - Reference       : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kend)      std::cout<< left << " - End             : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
        else if(i.first == tkensdf_record::kunknown)  std::cout<< left << " - Unknown         : " << setw(maxsize1+1) << i.second.first << " (" << setw(maxsize2) << i.second.second << ")" << std::endl;
    }
    std::cout<<std::endl;
}